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Biodesix offers analysis and consultative services for clients
wanting to evaluate our ProTS Platform or who want to have specific proteomics mass spectrometry
analysis performed by our world class experts. Project data confidentiality is ensured
throughout the entire project workflow. Collaborations provide a more cost effective way to
utilize Biodesix’s proprietary platform than the Company’s service offerings. See Services
Rapid Discovery
The Company’s proprietary mass spec analysis platform enables
the rapid discovery and evaluation of diagnostic signatures. In contrast to other techniques the
analysis is truly high-throughput (over the past 2 years we have analyzed over 3,500 patient
samples resulting in over 35,000 mass spectra). The platform does not require complicated laboratory
procedures, nor expensive kits as is the case with genomic analysis.
Clinical Research
The Company is currently engaged in multiple collaborations with clinical
and research partners (University of Colorado Health Sciences Center, Vanderbilt University Medical
Center, M. D. Anderson, Hospitale San Raffaele, Italy, University Clinics Innsbruck Austria,
University Clinic of Nijmegen, Netherlands, the NCI, the Biotherapy Development Agency).
The Company carefully selects projects by technical feasibility, sample availability, and
clinical and commercial value.
Projects
A typical collaborative project starts
with a discussion with the clinical investigators. If this is successful,
and an agreement is reached on contractual terms, the Company continues with
a small pilot study. The purpose of the pilot study is to assess the quality
of the mass spectra from the specific biological samples, to assess mass spec
reproducibility, and to obtain first hints for differentiating patterns.
The results of a successful pilot study are discussed with the
Biodesix commercial team, and a decision is made to enter the
diagnostic discovery phase. In this phase an appropriately
sized training set is used to optimize a classifier.
Following classifier identification, the classifier is
further validated on a fully blinded test set. Should this be successful,
additional validation is undertaken by attempting to obtain retrospectively
available samples from multiple institutions. Only if all of these steps are successful,
and the commercial value of a specific diagnostic has been confirmed, does the
Company proceed to product development and commercialization. This staged
approach allows our collaborations to minimize discovery cost and risk and thus
enables our clinical partners to explore a variety of clinical
questions that are of importance to them.
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